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Development of a Simple High-Throughput Screening Protocol Based on Biosynthetic Activity of Mycobacterium tuberculosis Glutamine Synthetase for the Identification of Novel Inhibitors

Combi Chem-Bio Resource Center, National Chemical Laboratory, Pune, India

Dhiman Sarkar

Combi Chem-Bio Resource Center, National Chemical Laboratory, Pune, India

A high-throughput screening protocol has been developed for Mycobacterium tuberculosis glutamine synthetase by quantitative estimation of inorganic phosphate. The K_m values determined at pH 6.8 are 22 mM for L-glutamic acid, 0.75 mM for NH₄Cl, 3.25 mM for MgCl₂, and 2.5 mM for adenosine triphosphate. The K_m value for glutamine is affected significantly by the increase in pH of assay buffer. At the saturating level of the substrate, the enzyme activity at pH 6.8 and 25° C is found to be linear up to 3 h. The reduction of enzyme activity is negligible even in presence of 10% DMSO. The Z' factor and signal-to-noise ratio are found to be 0.75 and 6.18, respectively, when the enzyme is used at 62.5 µg/ml concentration. The IC₅₀ values obtained at pH 6.8 for both L-methionine S-sulfoximine and DL-phosphothriacin are 500 µM and 30 µM, respectively, which is lowest compared to the values obtained at other pH levels. The Beckman Coulter high-throughput screening platform was found to take 5 h 9 min to complete the screening of 60 plates. For each assay plate, a replica plate is used to normalize the data. Screening of 1164 natural product fractions/extracts and synthetic molecules from an in-house library was able to identify 12 samples as confirmed hits. Altogether, the validation data from screening of a small set of an in-house library coupled with Z' and signal-to-noise values indicate that the protocol is robust for high-throughput screening of a diverse chemical library.

Key Words: glutamine synthetase • biosynthetic activity • high-throughput screening • Mycobacterium tuberculosis • Beckman Coulter

This version was published on December 1, 2006

Journal of Biomolecular Screening, Vol. 11, No. 8, 1035-1042 (2006)
DOI: 10.1177/1087057106292798


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